Pseudomonas stutzeri CCUG 29243, A458_20945
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0043190 | ATP-binding cassette (ABC) transporter complex |
Inferred from Sequence Model
Term mapped from: InterPro:PF02405
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psc02010 | ABC transporters | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 14 | 34 | - |
| Pfam | PF02405 | Permease MlaE | IPR030802 | ABC transporter permease MalE | 148 | 355 | 9.8E-68 |
| NCBIfam | TIGR00056 | JCVI: MlaE family lipid ABC transporter permease subunit | IPR003453 | ABC transport permease subunit MlaE, proteobacteria | 119 | 358 | 3.4E-66 |
| PANTHER | PTHR30188 | ABC TRANSPORTER PERMEASE PROTEIN-RELATED | IPR030802 | ABC transporter permease MalE | 118 | 359 | 1.1E-64 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.