Pseudomonas stutzeri DSM 10701, PSJM300_01220
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 58 | 158 | 1.5E-16 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 41 | 720 | 2.75E-116 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 39 | 164 | 3.8E-20 |
| CDD | cd01347 | ligand_gated_channel | - | - | 64 | 712 | 9.03115E-66 |
| PANTHER | PTHR32552 | FERRICHROME IRON RECEPTOR-RELATED | IPR039426 | TonB-dependent receptor-like | 20 | 720 | 2.1E-127 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 279 | 714 | 1.4E-47 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 169 | 720 | 1.0E-97 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.