Pseudomonas stutzeri DSM 10701, PSJM300_02010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13185
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 225 397 3.0E-18
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1045 1157 7.9807E-38
Gene3D G3DSA:3.40.50.2300 - - - 776 896 2.4E-24
Coils Coil Coil - - 213 233 -
MobiDBLite mobidb-lite consensus disorder prediction - - 418 442 -
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 558 721 3.4E-47
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 492 555 8.77652E-13
Gene3D G3DSA:3.40.50.2300 - - - 1042 1167 2.0E-43
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 777 884 4.5E-16
CDD cd19410 HK9-like_sensor - - 48 170 6.24009E-28
Gene3D G3DSA:1.10.287.130 - - - 455 557 1.4E-24
SUPERFAMILY SSF55781 GAF domain-like - - 244 413 8.24E-20
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1043 1157 1.0E-37
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 613 715 5.01674E-50
CDD cd00156 REC - - 900 999 2.65051E-17
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1045 1157 1.3E-27
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 548 720 1.83E-45
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 478 560 6.08E-20
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 492 559 1.1E-15
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 899 1007 1.9E-18
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 661 671 1.3E-15
MobiDBLite mobidb-lite consensus disorder prediction - - 418 446 -
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 775 885 9.0E-17
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 702 715 1.3E-15
MobiDBLite mobidb-lite consensus disorder prediction - - 724 759 -
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 775 890 3.13E-24
PANTHER PTHR45339 HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J - - 392 960 0.0
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 607 717 7.6E-27
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 897 1011 5.8E-16
Pfam PF13185 GAF domain IPR003018 GAF domain 251 386 7.0E-13
Gene3D G3DSA:3.40.50.2300 - - - 897 1041 4.8E-21
FunFam G3DSA:3.30.565.10:FF:000010 Sensor histidine kinase RcsC - - 558 720 5.4E-48
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 643 657 1.3E-15
Pfam PF05227 CHASE3 domain IPR007891 CHASE3 47 176 2.1E-25
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 606 718 9.2E-37
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 897 1020 7.97E-22
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 491 559 1.8E-19
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1041 1163 1.71E-38
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 678 696 1.3E-15
Coils Coil Coil - - 387 484 -
SMART SM00065 gaf_1 IPR003018 GAF domain 252 395 5.6E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.