Pseudomonas stutzeri DSM 10701, PSJM300_03115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00722 | complete | IPR006633 | Carbohydrate-binding/sugar hydrolysis domain | 41 | 181 | 6.3E-22 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 407 | 434 | - |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 227 | 249 | 610.0 |
| SMART | SM00722 | complete | IPR006633 | Carbohydrate-binding/sugar hydrolysis domain | 187 | 362 | 1.4E-24 |
| Pfam | PF05048 | Periplasmic copper-binding protein (NosD) | IPR007742 | Periplasmic copper-binding protein NosD, beta helix domain | 141 | 351 | 8.0E-50 |
| NCBIfam | TIGR03804 | JCVI: parallel beta-helix repeat (two copies) | IPR022441 | Parallel beta-helix repeat-2 | 283 | 323 | 2.7E-5 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 183 | 204 | 790.0 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 40 | 403 | 6.07E-54 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 109 | 130 | 68.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 131 | 160 | 210.0 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 216 | 356 | 4.1E-7 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 59 | 215 | 9.8E-11 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 287 | 308 | 23.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 79 | 107 | 980.0 |
| NCBIfam | TIGR04247 | JCVI: nitrous oxide reductase family maturation protein NosD | IPR026464 | Nitrous oxide reductase family maturation protein NosD | 32 | 415 | 0.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 161 | 182 | 7.3 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 310 | 336 | 9700.0 |
| NCBIfam | TIGR03804 | JCVI: parallel beta-helix repeat (two copies) | IPR022441 | Parallel beta-helix repeat-2 | 155 | 194 | 1.3E-5 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.