Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0019673 | GDP-mannose metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01472
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008446 | GDP-mannose 4,6-dehydratase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01472
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
MetaCyc | GDP-6-deoxy-D-talose biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | psj01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | GDP-D-perosamine biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | psj00520 | Amino sugar and nucleotide sugar metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psj00051 | Fructose and mannose metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | GDP-mycosamine biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | GDP-L-fucose biosynthesis I (from GDP-D-mannose) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | GDP-L-colitose biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
NCBIfam | TIGR01472 | JCVI: GDP-mannose 4,6-dehydratase | IPR006368 | GDP-mannose 4,6-dehydratase | 4 | 354 | 0.0 |
PANTHER | PTHR43715 | GDP-MANNOSE 4,6-DEHYDRATASE | IPR006368 | GDP-mannose 4,6-dehydratase | 2 | 360 | 0.0 |
SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 4 | 353 | 5.27E-88 |
Pfam | PF16363 | GDP-mannose 4,6 dehydratase | IPR016040 | NAD(P)-binding domain | 7 | 347 | 0.0 |
Gene3D | G3DSA:3.40.50.720 | - | - | - | 27 | 339 | 0.0 |
Gene3D | G3DSA:3.90.25.10 | - | - | - | 194 | 353 | 0.0 |
CDD | cd05260 | GDP_MD_SDR_e | - | - | 5 | 353 | 0.0 |
FunFam | G3DSA:3.40.50.720:FF:000924 | GDP-mannose 4,6 dehydratase | - | - | 1 | 203 | 2.4E-109 |
Hamap | MF_00955 | GDP-mannose 4,6-dehydratase [gmd]. | IPR006368 | GDP-mannose 4,6-dehydratase | 4 | 357 | 56.504021 |