Pseudomonas stutzeri DSM 10701, PSJM300_06795

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01726
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00726
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009432 SOS response
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00498
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00726
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0045892 negative regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00498
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00498
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.10.109.10 Umud Fragment, subunit A - - 79 202 4.6E-40
Pfam PF00717 Peptidase S24-like IPR015927 Peptidase S24/S26A/S26B/S26C 81 192 4.0E-31
SUPERFAMILY SSF51306 LexA/Signal peptidase IPR036286 LexA/Signal peptidase-like superfamily 79 201 4.88E-38
NCBIfam TIGR00498 JCVI: transcriptional repressor LexA IPR006200 Transcription regulator LexA 1 202 4.1E-76
Hamap MF_00015 LexA repressor [lexA]. IPR006200 Transcription regulator LexA 3 202 32.229221
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 3 70 1.09E-21
PRINTS PR00726 Repressor LexA serine protease (S24) family signature IPR006197 Peptidase S24, LexA-like 115 125 7.6E-14
CDD cd06529 S24_LexA-like IPR039418 LexA-like 115 191 8.89683E-25
FunFam G3DSA:1.10.10.10:FF:000009 LexA repressor - - 1 69 6.0E-33
PRINTS PR00726 Repressor LexA serine protease (S24) family signature IPR006197 Peptidase S24, LexA-like 154 166 7.6E-14
PANTHER PTHR33516 LEXA REPRESSOR - - 2 201 4.1E-55
PRINTS PR00726 Repressor LexA serine protease (S24) family signature IPR006197 Peptidase S24, LexA-like 126 137 7.6E-14
FunFam G3DSA:2.10.109.10:FF:000001 LexA repressor - - 79 202 7.7E-55
Pfam PF01726 LexA DNA binding domain IPR006199 LexA repressor, DNA-binding domain 1 65 1.2E-30
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 1 68 3.0E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.