Pseudomonas stutzeri DSM 10701, PSJM300_06805
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016740 | transferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:cd16913
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF03734 | L,D-transpeptidase catalytic domain | IPR005490 | L,D-transpeptidase catalytic domain | 7 | 160 | 1.8E-16 |
| SUPERFAMILY | SSF141523 | L,D-transpeptidase catalytic domain-like | IPR038063 | L,D-transpeptidase catalytic domain-like | 6 | 160 | 7.59E-23 |
| Gene3D | G3DSA:2.40.440.10 | - | IPR038063 | L,D-transpeptidase catalytic domain-like | 4 | 160 | 5.6E-19 |
| PANTHER | PTHR30582 | L,D-TRANSPEPTIDASE | - | - | 8 | 162 | 9.3E-13 |
| CDD | cd16913 | YkuD_like | IPR005490 | L,D-transpeptidase catalytic domain | 6 | 160 | 2.79303E-25 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.