Pseudomonas stutzeri DSM 10701, PSJM300_07790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00474
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00474
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00474
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 793 860 5.6E-12
Pfam PF00474 Sodium:solute symporter family IPR001734 Sodium/solute symporter 38 449 2.9E-6
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 905 1012 5.0E-16
FunFam G3DSA:1.10.287.130:FF:000063 Hybrid sensor histidine kinase/response regulator - - 752 858 4.1E-39
Gene3D G3DSA:1.10.287.130 - - - 757 858 1.0E-16
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 624 746 1.62E-9
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 776 861 2.16E-15
CDD cd00075 HATPase - - 909 1009 3.1652E-26
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 866 1014 2.1E-30
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 939 953 4.5E-9
FunFam G3DSA:1.20.1730.10:FF:000022 Sensor histidine kinase - - 27 544 0.0
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1035 1153 9.25E-20
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 974 992 4.5E-9
CDD cd10322 SLC5sbd - - 7 465 3.06817E-61
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 793 860 9.6E-12
PANTHER PTHR43047 TWO-COMPONENT HISTIDINE PROTEIN KINASE - - 541 1154 1.3E-67
Gene3D G3DSA:3.40.50.2300 - - - 1032 1155 9.1E-18
Gene3D G3DSA:1.20.1730.10 Sodium/glucose cotransporter IPR038377 Sodium/glucose symporter superfamily 34 535 4.8E-61
Coils Coil Coil - - 759 779 -
CDD cd00156 REC - - 1039 1139 8.7419E-18
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 849 1012 8.12E-35
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 998 1011 4.5E-9
Pfam PF12860 PAS fold - - 639 753 3.6E-42
Gene3D G3DSA:3.30.450.20 PAS domain - - 620 753 9.1E-12
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 791 856 2.64723E-12
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1036 1149 2.8E-10
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 957 967 4.5E-9
FunFam G3DSA:3.30.565.10:FF:000049 Two-component sensor histidine kinase - - 862 1015 7.9E-48
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 904 1014 4.6E-23
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1038 1148 2.1E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.