Pseudomonas stutzeri DSM 10701, PSJM300_11515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00793
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21225
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009073 aromatic amino acid family biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21225
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psj00400 Phenylalanine, tyrosine and tryptophan biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc 3-dehydroquinate biosynthesis I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psj01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psj02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psj01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psj01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psj01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF001361 DAHP_synthase IPR006219 DAHP synthase, class 1 2 355 0.0
NCBIfam TIGR00034 JCVI: 3-deoxy-7-phosphoheptulonate synthase IPR006219 DAHP synthase, class 1 7 349 0.0
SUPERFAMILY SSF51569 Aldolase - - 8 348 0.0
PANTHER PTHR21225 PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE DAHP SYNTHETASE IPR006219 DAHP synthase, class 1 5 351 0.0
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 3 352 0.0
FunFam G3DSA:3.20.20.70:FF:000005 Phospho-2-dehydro-3-deoxyheptonate aldolase - - 1 355 0.0
Pfam PF00793 DAHP synthetase I family IPR006218 DAHP synthetase I/KDSA 45 339 2.3E-94

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.