Pseudomonas stutzeri DSM 10701, PSJM300_17080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 230 | 415 | 5.2E-43 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 233 | 416 | 4.3E-50 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 203 | 418 | 8.5E-57 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 349 | 369 | - |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 247 | 415 | 1.18E-38 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 240 | 413 | 3.3E-32 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 243 | 413 | 1.8421E-43 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 368 | 410 | 2.8E-7 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 242 | 349 | 1.2E-22 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.