Pseudomonas stutzeri RCH2, Psest_0664

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.20 PAS domain - - 176 265 9.6E-13
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 320 486 3.4E-48
Pfam PF02743 Cache domain IPR033479 Double Cache domain 1 78 259 6.1E-12
CDD cd01949 GGDEF IPR000160 GGDEF domain 326 483 2.79332E-61
Gene3D G3DSA:3.30.450.20 PAS domain - - 30 173 1.1E-32
CDD cd12914 PDC1_DGC_like - - 53 174 4.48607E-21
CDD cd12915 PDC2_DGC_like - - 177 275 4.03384E-12
SMART SM00267 duf1_3 IPR000160 GGDEF domain 314 486 7.0E-57
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 325 482 1.0E-41
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 322 486 5.3E-46
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 314 488 3.2E-55
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 330 484 3.3E-48
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 274 489 9.6E-67

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.