Pseudomonas stutzeri RCH2, Psest_0754

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF12840 Helix-turn-helix domain - - 7 79 1.7E-11
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 2 101 2.5E-25
SMART SM00418 arsrmega2 IPR001845 HTH ArsR-type DNA-binding domain 7 99 1.0E-13
PANTHER PTHR33154 TRANSCRIPTIONAL REGULATOR, ARSR FAMILY - - 6 100 1.6E-20
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 9 99 1.43658E-16
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 3 97 1.18E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.