Pseudomonas stutzeri RCH2, Psest_0794
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00722 | complete | IPR006633 | Carbohydrate-binding/sugar hydrolysis domain | 47 | 187 | 2.6E-23 |
| Pfam | PF05048 | Periplasmic copper-binding protein (NosD) | IPR007742 | Periplasmic copper-binding protein NosD, beta helix domain | 144 | 357 | 4.2E-52 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 189 | 210 | 88.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 316 | 354 | 5200.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 233 | 255 | 970.0 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 56 | 277 | 5.3E-21 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 278 | 356 | 2.8E-6 |
| NCBIfam | TIGR03804 | JCVI: parallel beta-helix repeat (two copies) | IPR022441 | Parallel beta-helix repeat-2 | 161 | 201 | 3.5E-5 |
| NCBIfam | TIGR04247 | JCVI: nitrous oxide reductase family maturation protein NosD | IPR026464 | Nitrous oxide reductase family maturation protein NosD | 43 | 421 | 0.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 85 | 113 | 7100.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 167 | 188 | 4.2 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 45 | 409 | 9.43E-56 |
| SMART | SM00722 | complete | IPR006633 | Carbohydrate-binding/sugar hydrolysis domain | 193 | 368 | 9.5E-30 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 211 | 232 | 5900.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 115 | 136 | 8.3 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 293 | 314 | 24.0 |
| NCBIfam | TIGR03804 | JCVI: parallel beta-helix repeat (two copies) | IPR022441 | Parallel beta-helix repeat-2 | 289 | 330 | 1.4E-5 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 137 | 166 | 790.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.