Pseudomonas stutzeri RCH2, Psest_1635

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00073
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psh02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psh02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00304 HAMP_11 IPR003660 HAMP domain 191 243 1.9E-9
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 395 511 1.6E-38
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 269 349 1.96E-23
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 337 509 4.32E-45
Gene3D G3DSA:1.10.287.130 - - - 249 346 5.2E-32
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 281 344 1.12777E-16
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 670 784 3.96604E-43
Coils Coil Coil - - 231 262 -
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 400 509 9.88146E-55
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 454 464 4.0E-14
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 395 510 4.0E-28
FunFam G3DSA:1.10.287.130:FF:000003 Histidine kinase - - 248 346 2.0E-44
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 495 508 4.0E-14
Gene3D G3DSA:3.40.50.2300 - - - 663 788 7.3E-39
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 436 450 4.0E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 808 915 2.0E-27
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 668 784 9.6E-40
Pfam PF09984 Single cache domain 4 IPR019247 Histidine kinase BarA, N-terminal 36 167 1.3E-15
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 284 348 2.8E-22
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 824 914 1.33924E-10
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 347 514 6.8E-51
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 524 649 1.18E-5
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 821 917 1.3E-12
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 670 784 2.1E-27
Pfam PF00672 HAMP domain IPR003660 HAMP domain 189 238 1.4E-10
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 283 348 7.6E-28
FunFam G3DSA:3.30.565.10:FF:000010 Sensor histidine kinase RcsC - - 347 513 5.2E-55
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 830 911 6.0E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 767 909 2.62E-21
CDD cd06225 HAMP - - 196 238 9.45696E-7
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 668 794 4.41E-37
Gene3D G3DSA:6.10.340.10 - - - 158 248 1.0E-11
PANTHER PTHR45339 HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J - - 226 792 0.0
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 471 489 4.0E-14
SUPERFAMILY SSF158472 HAMP domain-like - - 191 240 5.1E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.