Pseudomonas stutzeri RCH2, Psest_1818

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008446 GDP-mannose 4,6-dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00955
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019673 GDP-mannose metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00955
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psh00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psh00051 Fructose and mannose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psh01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.720 - - - 25 337 0.0
FunFam G3DSA:3.40.50.720:FF:000924 GDP-mannose 4,6 dehydratase - - 1 203 4.4E-108
Pfam PF16363 GDP-mannose 4,6 dehydratase IPR016040 NAD(P)-binding domain 5 345 0.0
PANTHER PTHR43715 GDP-MANNOSE 4,6-DEHYDRATASE IPR006368 GDP-mannose 4,6-dehydratase 2 358 0.0
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 2 351 2.24E-88
Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. IPR006368 GDP-mannose 4,6-dehydratase 2 355 56.331089
CDD cd05260 GDP_MD_SDR_e - - 3 350 0.0
Gene3D G3DSA:3.90.25.10 - - - 192 350 0.0
NCBIfam TIGR01472 JCVI: GDP-mannose 4,6-dehydratase IPR006368 GDP-mannose 4,6-dehydratase 3 351 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.