Pseudomonas stutzeri RCH2, Psest_2706

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0017150 tRNA dihydrouridine synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006621
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008033 tRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006621
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0002943 tRNA dihydrouridine synthesis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.120.1460 - - - 262 333 6.4E-21
NCBIfam TIGR00742 JCVI: tRNA dihydrouridine(20/20a) synthase DusA IPR004653 tRNA-dihydrouridine(20/20a) synthase 16 331 0.0
Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. IPR004653 tRNA-dihydrouridine(20/20a) synthase 12 333 51.011482
FunFam G3DSA:3.20.20.70:FF:000083 tRNA-dihydrouridine(20/20a) synthase - - 15 256 1.1E-114
CDD cd02801 DUS_like_FMN IPR035587 DUS-like, FMN-binding domain 17 256 1.09976E-85
Pfam PF01207 Dihydrouridine synthase (Dus) IPR035587 DUS-like, FMN-binding domain 20 327 1.3E-89
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 14 256 9.2E-79
PANTHER PTHR42907 FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN IPR004653 tRNA-dihydrouridine(20/20a) synthase 13 331 3.2E-122
SUPERFAMILY SSF51395 FMN-linked oxidoreductases - - 17 327 1.47E-76
PIRSF PIRSF006621 Dus IPR001269 tRNA-dihydrouridine synthase 6 330 3.6E-76

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.