Pseudomonas stutzeri RCH2, Psest_2914

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03074
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0048038 quinone binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03074
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03074
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psh00030 Pentose phosphate pathway 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psh01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psh01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psh01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01011 PQQ enzyme repeat IPR002372 Pyrrolo-quinoline quinone repeat 705 739 1.2E-5
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 217 248 1.1E-4
PANTHER PTHR32303 QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) - - 152 772 1.0E-62
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 697 730 9.1E-4
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 332 373 0.92
Gene3D G3DSA:2.140.10.10 - - - 147 774 0.0
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily 158 775 0.0
Pfam PF01011 PQQ enzyme repeat IPR002372 Pyrrolo-quinoline quinone repeat 435 461 2.8E-4
CDD cd10280 PQQ_mGDH IPR017511 PQQ-dependent membrane bound dehydrogenase 165 774 0.0
Pfam PF13360 PQQ-like domain IPR002372 Pyrrolo-quinoline quinone repeat 216 371 7.0E-10
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 401 451 64.0
NCBIfam TIGR03074 JCVI: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family IPR017511 PQQ-dependent membrane bound dehydrogenase 5 775 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.