Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 89 | 295 | 1.9E-40 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 4 | 111 | 8.18E-21 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 1 | 85 | 6.6E-24 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 5 | 62 | 6.4E-19 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 88 | 296 | 3.2E-63 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 4 | 296 | 5.2E-85 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 3 | 87 | 8.6E-22 |
CDD | cd08472 | PBP2_CrgA_like_3 | - | - | 92 | 295 | 1.72873E-105 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 90 | 299 | 3.98E-43 |
Coils | Coil | Coil | - | - | 23 | 43 | - |