Pseudomonas stutzeri RCH2, Psest_3010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00024
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0048472 threonine-phosphate decarboxylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00024
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00024
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psh00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psh01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR34308 COBALAMIN BIOSYNTHESIS PROTEIN CBIB IPR004485 Cobalamin biosynthesis CobD/CbiB 4 296 1.3E-101
Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. IPR004485 Cobalamin biosynthesis CobD/CbiB 1 303 108.271622
NCBIfam TIGR00380 JCVI: adenosylcobinamide-phosphate synthase CbiB IPR004485 Cobalamin biosynthesis CobD/CbiB 9 265 6.0E-60
Pfam PF17113 Regulatory signalling modulator protein AmpE IPR031347 Protein AmpE 135 225 3.7E-6
Pfam PF03186 CobD/Cbib protein IPR004485 Cobalamin biosynthesis CobD/CbiB 9 284 4.4E-96

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.