Pseudomonas mendocina ymp, Pmen_0735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 199 | 373 | 1.4E-53 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 196 | 372 | 5.1E-52 |
| TIGRFAM | TIGR00254 | GGDEF: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 208 | 373 | 1.2E-42 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 211 | 371 | 1.64381E-56 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 191 | 373 | 2.8E-60 |
| Coils | Coil | Coil | - | - | 303 | 323 | - |
| PANTHER | PTHR45138:SF9 | DIGUANYLATE CYCLASE DGCM-RELATED | - | - | 191 | 373 | 2.8E-60 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 215 | 373 | 1.73E-42 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 212 | 369 | 6.6E-42 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.