Pseudomonas mendocina ymp, Pmen_2312

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50893
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50893
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 21 207 1.11E-43
SMART SM00382 IPR003593 AAA+ ATPase domain 25 220 6.2E-14
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like 20 171 5.7E-24
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile. IPR003439 ABC transporter-like 2 233 17.387
ProSitePatterns PS00211 ABC transporters family signature. IPR017871 ABC transporter, conserved site 143 157 -
Gene3D G3DSA:3.40.50.300 1 233 4.9E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.