Pseudomonas mendocina NK-01, MDS_0015

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pmk03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.25.40.590	Type IV / VI secretion system, DotU	IPR038522	Type IV / VI secretion system, DotU superfamily	58	215	2.0E-49
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	290	442	3.0E-41
NCBIfam	TIGR03349	JCVI: DotU/TssL family secretion system protein	IPR017732	Type IV / VI secretion system, DotU	60	269	2.7E-72
NCBIfam	NF038228	NCBIFAM: type IVB secretion system protein IcmH/DotU	-	-	58	275	3.7E-49
NCBIfam	TIGR03350	JCVI: type VI secretion system protein TssL C-terminal extension domain	IPR017733	Type VI secretion system, OmpA-like domain, proteobacteria	301	437	2.9E-51
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	1	58	-
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	323	437	1.03E-28
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	333	431	1.2E-13
Pfam	PF09850	Type VI secretion system protein DotU	IPR017732	Type IV / VI secretion system, DotU	61	263	7.3E-70
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	333	437	1.28814E-33
PANTHER	PTHR38033	MEMBRANE PROTEIN-RELATED	-	-	51	279	2.0E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.