Pseudomonas mendocina NK-01, MDS_0652

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02195
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pmk00540 Lipopolysaccharide biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pmk01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30160 TETRAACYLDISACCHARIDE 4'-KINASE-RELATED - - 1 338 1.5E-75
CDD cd03789 GT9_LPS_heptosyltransferase IPR002201 Glycosyl transferase, family 9 2 335 3.35298E-83
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 2 144 1.7E-37
FunFam G3DSA:3.40.50.2000:FF:000022 ADP-heptose--LPS heptosyltransferase II - - 2 147 3.0E-78
NCBIfam TIGR02195 JCVI: lipopolysaccharide heptosyltransferase II IPR011910 ADP-heptose--LPS heptosyltransferase 2 2 336 0.0
FunFam G3DSA:3.40.50.2000:FF:000023 ADP-heptose--LPS heptosyltransferase II - - 159 338 1.0E-71
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase - - 1 338 6.28E-101
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 158 339 2.2E-52
Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) IPR002201 Glycosyl transferase, family 9 69 318 2.9E-85

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.