Pseudomonas mendocina NK-01, MDS_0822
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 223 | 380 | 5.8E-40 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 213 | 384 | 1.3E-44 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 207 | 383 | 3.0E-50 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 219 | 384 | 2.4E-41 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 226 | 384 | 1.26E-41 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 92 | 385 | 7.6E-57 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 210 | 384 | 1.6E-52 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 222 | 382 | 2.00073E-55 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.