Pseudomonas mendocina NK-01, MDS_1461

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140663 ATP-dependent FeS chaperone activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016226 iron-sulfur cluster assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_02040 Iron-sulfur cluster carrier protein. IPR019591 Mrp/NBP35 ATP-binding protein 93 343 37.014671
SUPERFAMILY SSF117916 Fe-S cluster assembly (FSCA) domain-like IPR034904 Fe-S cluster assembly domain superfamily 4 85 4.9E-14
CDD cd02037 Mrp_NBP35 IPR019591 Mrp/NBP35 ATP-binding protein 100 314 1.2941E-111
Gene3D G3DSA:3.30.300.130 - IPR034904 Fe-S cluster assembly domain superfamily 2 92 9.2E-8
Pfam PF10609 NUBPL iron-transfer P-loop NTPase IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 98 342 1.7E-99
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 100 346 6.86E-59
FunFam G3DSA:3.40.50.300:FF:000418 Iron-sulfur cluster carrier protein - - 94 348 2.9E-119
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 94 349 2.0E-88
Pfam PF01883 Iron-sulfur cluster assembly protein IPR002744 MIP18 family-like 6 79 8.6E-16
PANTHER PTHR42961 IRON-SULFUR PROTEIN NUBPL IPR044304 Iron-sulfur protein NUBPL-like 5 348 2.1E-123

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.