Pseudomonas mendocina NK-01, MDS_1468
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pmk01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pmk00760 | Nicotinate and nicotinamide metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.850 | - | IPR036380 | Isochorismatase-like superfamily | 2 | 205 | 1.1E-36 |
| CDD | cd01011 | nicotinamidase | - | - | 2 | 197 | 9.14858E-82 |
| Pfam | PF00857 | Isochorismatase family | IPR000868 | Isochorismatase-like | 7 | 196 | 1.9E-20 |
| SUPERFAMILY | SSF52499 | Isochorismatase-like hydrolases | IPR036380 | Isochorismatase-like superfamily | 2 | 197 | 1.96E-30 |
| PANTHER | PTHR11080 | PYRAZINAMIDASE/NICOTINAMIDASE | - | - | 2 | 200 | 2.9E-33 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.