Pseudomonas mendocina NK-01, MDS_1470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0017000 antibiotic biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR34218
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.439.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR34218
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.30.120.10 - IPR043146 Penicillin amidase type, N-terminal domain, B-knob 328 409 0.0
CDD cd03747 Ntn_PGA_like - - 256 553 2.72777E-94
PANTHER PTHR34218 PEPTIDASE S45 PENICILLIN AMIDASE IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase 4 827 0.0
SUPERFAMILY SSF56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases) IPR029055 Nucleophile aminohydrolases, N-terminal 46 832 0.0
PIRSF PIRSF001227 Pen_acylase IPR014395 Penicillin/GL-7-ACA/AHL acylase 5 834 0.0
Gene3D G3DSA:1.10.1400.10 - IPR043147 Penicillin amidase type, A-knob 556 708 0.0
Gene3D G3DSA:1.10.439.10 Penicillin Amidohydrolase, domain 1 IPR023343 Penicillin amidase type, domain 1 20 179 2.1E-40
Gene3D G3DSA:3.60.20.10 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 IPR029055 Nucleophile aminohydrolases, N-terminal 256 813 0.0
Pfam PF01804 Penicillin amidase IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase 47 823 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.