Pseudomonas mendocina NK-01, MDS_2254

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008289 lipid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01852
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00234 START_1 IPR002913 START domain 3 198 0.0078
PANTHER PTHR19308 PHOSPHATIDYLCHOLINE TRANSFER PROTEIN - - 19 187 2.2E-13
SUPERFAMILY SSF55961 Bet v1-like - - 16 196 5.5E-40
CDD cd08876 START_1 IPR028347 START domain-containing protein 5 197 5.4886E-78
Pfam PF01852 START domain IPR002913 START domain 14 181 2.3E-12
Gene3D G3DSA:3.30.530.20 - IPR023393 START-like domain superfamily 21 198 5.1E-44
PIRSF PIRSF039033 START_dom IPR028347 START domain-containing protein 1 199 5.7E-76

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.