Pseudomonas mendocina NK-01, MDS_2505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05275
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005507 copper ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05275
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006878 cellular copper ion homeostasis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05275
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 22 78 -
MobiDBLite mobidb-lite consensus disorder prediction - - 60 78 -
SUPERFAMILY SSF56935 Porins - - 186 322 6.23E-5
Pfam PF05275 Copper resistance protein B precursor (CopB) IPR007939 Copper resistance B precursor 145 349 4.6E-93
MobiDBLite mobidb-lite consensus disorder prediction - - 98 118 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.