Pseudomonas mendocina NK-01, MDS_3170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 552 663 4.6E-20
Pfam PF07696 7TMR-DISM extracellular 2 IPR011622 7TM-DISM receptor, extracellular domain, type 2 53 186 1.8E-26
Gene3D G3DSA:1.10.287.130 - - - 397 504 7.1E-11
PANTHER PTHR43047 TWO-COMPONENT HISTIDINE PROTEIN KINASE - - 368 802 3.6E-66
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 625 643 6.5E-6
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 687 803 6.97E-31
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 592 606 6.5E-6
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 441 500 2.44286E-7
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 551 665 1.4E-25
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 443 504 2.1E-6
Pfam PF07695 7TM diverse intracellular signalling IPR011623 7TM-DISM receptor, extracellular domain, type 1 200 384 1.1E-7
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 690 799 2.1E-20
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 493 663 3.41E-32
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 429 504 2.75E-11
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 688 799 3.6E-24
Gene3D G3DSA:2.60.40.2380 - - - 48 193 2.1E-27
Gene3D G3DSA:3.40.50.2300 - - - 688 812 3.8E-30
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 505 668 1.7E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.