Pseudomonas mendocina NK-01, MDS_3745

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3745
Name
Replicon chromosome
Genomic location 4120391 - 4120537 (+ strand)

Cross-References

RefSeq YP_004381528.1
GI 330504659
Entrez 10458527
INSDC AEB59776.1
NCBI Locus Tag MDS_3745
UniParc UPI000206DEB9
UniProtKB Acc F4DU88
UniProtKB ID F4DU88_PSEMN
UniRef100 UniRef100_F4DU88
UniRef50 UniRef50_F4DU88
UniRef90 UniRef90_F4DU88

Product

Feature Type CDS
Coding Frame 1
Product Name
ISPssy, transposase
Synonyms
Evidence for Translation
Charge (pH 7) 6.46
Kyte-Doolittle Hydrophobicity Value -0.044
Molecular Weight (kDa) 5465.5
Isoelectric Point (pI) 12.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 22 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG013904 (406 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3745

Human Homologs

References

No references are associated with this feature.