Pseudomonas mendocina NK-01, MDS_3756

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016021	integral component of membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30414	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00924	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0008381	mechanosensitive ion channel activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30414	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00924	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0071470	cellular response to osmotic stress	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30414	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF50182	Sm-like ribonucleoproteins	IPR010920	LSM domain superfamily	183	250	1.73E-11
Pfam	PF00924	Mechanosensitive ion channel	IPR006685	Mechanosensitive ion channel MscS	140	395	3.5E-48
Gene3D	G3DSA:2.30.30.60	-	IPR023408	Mechanosensitive ion channel MscS, beta-domain superfamily	200	250	1.7E-8
PANTHER	PTHR30414	UNCHARACTERIZED	IPR030192	Miniconductance mechanosensitive channel YbdG	3	410	0.0
Coils	Coil	Coil	-	-	293	313	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.