Pseudomonas mendocina NK-01, MDS_3760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0030170 | pyridoxal phosphate binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0009058 | biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 | IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | 16 | 379 | 0.0 |
| FunFam | G3DSA:3.40.640.10:FF:000033 | Aspartate aminotransferase | - | - | 56 | 277 | 8.7E-83 |
| Pfam | PF00155 | Aminotransferase class I and II | IPR004839 | Aminotransferase, class I/classII | 27 | 379 | 1.3E-62 |
| CDD | cd00609 | AAT_like | - | - | 27 | 379 | 1.3091E-102 |
| Gene3D | G3DSA:3.40.640.10 | - | IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | 39 | 278 | 0.0 |
| PANTHER | PTHR43807 | FI04487P | - | - | 5 | 379 | 1.5E-121 |
| SUPERFAMILY | SSF53383 | PLP-dependent transferases | IPR015424 | Pyridoxal phosphate-dependent transferase | 3 | 381 | 8.2E-103 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.