Pseudomonas mendocina NK-01, MDS_3762

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005515	protein binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:2.130.10.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR03300	JCVI: outer membrane protein assembly factor BamB	IPR017687	Outer membrane protein assembly factor BamB	9	380	0.0
PANTHER	PTHR34512	CELL SURFACE PROTEIN	-	-	40	378	1.2E-29
SMART	SM00564	ire1_9	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat	320	351	400.0
Pfam	PF13360	PQQ-like domain	IPR002372	Pyrrolo-quinoline quinone repeat	78	308	4.1E-48
SMART	SM00564	ire1_9	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat	65	96	0.0013
SMART	SM00564	ire1_9	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat	145	176	0.088
Gene3D	G3DSA:2.130.10.10	-	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	19	383	4.2E-107
Hamap	MF_00923	Outer membrane protein assembly factor BamB [bamB].	IPR017687	Outer membrane protein assembly factor BamB	3	382	39.079422
SUPERFAMILY	SSF50998	Quinoprotein alcohol dehydrogenase-like	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	32	372	1.18E-78
SMART	SM00564	ire1_9	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat	279	310	590.0
SMART	SM00564	ire1_9	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat	190	221	81.0
SMART	SM00564	ire1_9	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat	104	136	0.22
SMART	SM00564	ire1_9	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat	240	272	0.41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.