Pseudomonas mendocina NK-01, MDS_3763

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0044877 protein-containing complex binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR38035
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF006170 YfgM IPR026039 Ancillary SecYEG translocon subunit YfgM 1 212 3.4E-63
Pfam PF09976 Tetratricopeptide repeat-like domain IPR018704 Tetratricopeptide repeat-like domain 12 209 8.1E-62
SUPERFAMILY SSF48452 TPR-like IPR011990 Tetratricopeptide-like helical domain superfamily 97 190 7.3E-6
PANTHER PTHR38035 UPF0070 PROTEIN YFGM IPR026039 Ancillary SecYEG translocon subunit YfgM 2 208 2.3E-61
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 93 207 2.1E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.