Pseudomonas mendocina NK-01, MDS_4142
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003855 | 3-dehydroquinate dehydratase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01088
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pmk01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pmk01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pmk00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pmk01230 | Biosynthesis of amino acids | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pmk01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.9100 | Dehydroquinase, class II | IPR036441 | Dehydroquinase, class II superfamily | 2 | 146 | 2.5E-70 |
| CDD | cd00466 | DHQase_II | IPR001874 | Dehydroquinase, class II | 5 | 142 | 2.81315E-92 |
| PIRSF | PIRSF001399 | DHQase_2 | IPR001874 | Dehydroquinase, class II | 1 | 146 | 3.8E-62 |
| PANTHER | PTHR21272 | CATABOLIC 3-DEHYDROQUINASE | IPR001874 | Dehydroquinase, class II | 1 | 145 | 1.8E-62 |
| Pfam | PF01220 | Dehydroquinase class II | IPR001874 | Dehydroquinase, class II | 5 | 140 | 5.8E-62 |
| Hamap | MF_00169 | 3-dehydroquinate dehydratase [aroQ]. | IPR001874 | Dehydroquinase, class II | 1 | 146 | 74.11441 |
| SUPERFAMILY | SSF52304 | Type II 3-dehydroquinate dehydratase | IPR036441 | Dehydroquinase, class II superfamily | 4 | 143 | 5.1E-63 |
| NCBIfam | TIGR01088 | JCVI: 3-dehydroquinate dehydratase, type II | IPR001874 | Dehydroquinase, class II | 5 | 143 | 4.8E-61 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.