Pseudomonas mendocina NK-01, MDS_4187

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_4187
Name
Replicon	chromosome
Genomic location	4598000 - 4598290 (- strand)

Cross-References

RefSeq	YP_004381970.1
GI	330505101
Entrez	10458969
INSDC	AEB60218.1
NCBI Locus Tag	MDS_4187
UniParc	UPI000206DBFF
UniProtKB Acc	F4DZC9
UniProtKB ID	F4DZC9_PSEMN
UniRef100	UniRef100_F4DZC9
UniRef50	UniRef50_P00948
UniRef90	UniRef90_S6ANN7

Product

Feature Type	CDS
Coding Frame	1
Product Name	muconolactone delta-isomerase
Synonyms
Evidence for Translation
Charge (pH 7)	-0.60
Kyte-Doolittle Hydrophobicity Value	-0.476
Molecular Weight (kDa)	11.2
Isoelectric Point (pI)	6.80

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
1MLI	INTRAMOLECULAR OXIDOREDUCTASE	11/02/89	CRYSTAL STRUCTURE OF MUCONOLACTONE ISOMERASE AT 3.3 ANGSTROMS RESOLUTION	Pseudomonas putida	3.3	X-RAY DIFFRACTION	90.6

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 55 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003052 (465 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_4187 Search term: muconolactone delta-isomerase

Human Homologs

References