Pseudomonas mendocina NK-01, MDS_4400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02771
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47203
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.140.10 - - - 282 450 5.2E-97
Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal 41 158 3.5E-11
Gene3D G3DSA:2.40.110.10 - IPR046373 Acyl-CoA oxidase/dehydrogenase, middle domain superfamily 161 281 5.2E-97
Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain 468 593 6.2E-37
FunFam G3DSA:2.40.110.10:FF:000031 Acyl-CoA dehydrogenase, putative - - 161 287 1.7E-45
SUPERFAMILY SSF56645 Acyl-CoA dehydrogenase NM domain-like IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily 38 279 2.75E-61
PANTHER PTHR42803 ACYL-COA DEHYDROGENASE - - 1 597 0.0
Pfam PF02770 Acyl-CoA dehydrogenase, middle domain IPR006091 Acyl-CoA oxidase/dehydrogenase, middle domain 163 272 1.4E-15
SUPERFAMILY SSF47203 Acyl-CoA dehydrogenase C-terminal domain-like IPR036250 Acyl-CoA dehydrogenase-like, C-terminal 287 475 7.89E-47
Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPR009075 Acyl-CoA dehydrogenase/oxidase, C-terminal 282 451 2.3E-20
FunFam G3DSA:1.10.540.10:FF:000080 Probable acyl-coA dehydrogenase - - 33 159 4.1E-43
Pfam PF12418 Acyl-CoA dehydrogenase N terminal IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria 3 35 1.3E-11
Gene3D G3DSA:1.10.540.10 - IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily 44 160 5.2E-97

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.