Pseudomonas mendocina NK-01, MDS_4410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015689 molybdate ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00638
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030151 molybdenum ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF005763
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 9 108 2.6E-29
Pfam PF03459 TOBE domain IPR005116 Transport-associated OB, type 1 188 249 5.4E-13
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 14 99 9.19E-26
ProSiteProfiles PS51866 Mop domain profile. 114 180 21.304
Pfam PF03459 TOBE domain IPR005116 Transport-associated OB, type 1 115 176 4.4E-16
PIRSF PIRSF005763 IPR016462 Molybdate-dependent transcriptional regulator ModE 6 254 4.0E-82
SUPERFAMILY SSF50331 IPR008995 Molybdate/tungstate binding, C-terminal 164 250 3.16E-11
Gene3D G3DSA:2.40.50.100 109 249 4.5E-37
Coils Coil 81 101 -
ProSiteProfiles PS51866 Mop domain profile. 185 252 16.011
Gene3D G3DSA:2.40.50.100 171 244 4.5E-37
SUPERFAMILY SSF50331 IPR008995 Molybdate/tungstate binding, C-terminal 113 180 4.89E-18
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 16 79 1.6E-18
TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain IPR004606 Molybdenum-pterin binding 113 178 7.5E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.