Pseudomonas mendocina NK-01, MDS_4522

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pmk02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13416 Bacterial extracellular solute-binding protein IPR006059 Bacterial extracellular solute-binding protein 48 325 1.8E-33
PANTHER PTHR30222 SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN - - 15 311 3.3E-27
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 29 355 1.26E-54
Gene3D G3DSA:3.40.190.10 - - - 141 342 2.6E-107
CDD cd13589 PBP2_polyamine_RpCGA009 - - 30 307 1.43229E-88
Gene3D G3DSA:3.40.190.10 - - - 32 335 2.6E-107

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.