Pseudomonas mendocina NK-01, MDS_4536

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00099
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00099
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000156 phosphorelay response regulator activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00099
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00099
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008984 protein-glutamate methylesterase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00099
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pmk02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pmk02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd16432 CheB_Rec IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 169 350 5.41621E-101
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 4 120 3.9E-20
Gene3D G3DSA:3.40.50.180 - IPR035909 Methylesterase CheB, C-terminal 160 353 6.4E-71
CDD cd17541 REC_CheB-like - - 4 128 1.09262E-57
PIRSF PIRSF000876 RR_chemtxs_CheB IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 1 354 0.0
PANTHER PTHR42872 PROTEIN-GLUTAMATE METHYLESTERASE/PROTEIN-GLUTAMINE GLUTAMINASE - - 1 351 1.4E-120
SUPERFAMILY SSF52738 Methylesterase CheB, C-terminal domain IPR035909 Methylesterase CheB, C-terminal 165 351 8.37E-70
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 112 2.28E-26
Hamap MF_00099 Protein-glutamate methylesterase/protein-glutamine glutaminase [cheB]. IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 4 353 39.592186
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 6 109 8.3E-23
Gene3D G3DSA:3.40.50.2300 - - - 1 131 7.1E-29
Pfam PF01339 CheB methylesterase IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 170 348 1.8E-58

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.