Pseudomonas mendocina NK-01, MDS_4813

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008237 metallopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.390.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43660
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004222 metalloendopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43660
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008233 peptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06456
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01432 Peptidase family M3 IPR001567 Peptidase M3A/M3B catalytic domain 225 677 0.0
CDD cd06456 M3A_DCP IPR034005 Peptidyl-dipeptidase DCP 22 677 0.0
Gene3D G3DSA:1.20.1050.40 Endopeptidase. Chain P; domain 1 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal 15 141 5.3E-7
Gene3D G3DSA:1.10.1370.10 Neurolysin, domain 3 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 153 672 0.0
Pfam PF19310 Neurolysin/Thimet oligopeptidase, N-terminal domain IPR045666 Oligopeptidase A, N-terminal domain 29 151 4.8E-28
SUPERFAMILY SSF55486 Metalloproteases ("zincins"), catalytic domain - - 4 677 0.0
Gene3D G3DSA:3.40.390.10 Collagenase (Catalytic Domain) IPR024079 Metallopeptidase, catalytic domain superfamily 360 509 0.0
PANTHER PTHR43660 DIPEPTIDYL CARBOXYPEPTIDASE IPR045090 Peptidase M3A/M3B 3 679 0.0
FunFam G3DSA:3.40.390.10:FF:000009 Oligopeptidase A - - 360 509 1.2E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.