Pseudomonas mendocina NK-01, MDS_4827

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01799
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01799
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00207
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.150.120 - - - 75 152 8.0E-25
CDD cd00207 fer2 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 2 51 9.62987E-7
SUPERFAMILY SSF54292 2Fe-2S ferredoxin-like IPR036010 2Fe-2S ferredoxin-like superfamily 2 77 4.06E-25
PANTHER PTHR44379 OXIDOREDUCTASE WITH IRON-SULFUR SUBUNIT - - 2 150 1.2E-49
Gene3D G3DSA:3.10.20.30 - IPR012675 Beta-grasp domain superfamily 1 74 1.4E-24
Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 5 62 1.8E-9
Pfam PF01799 [2Fe-2S] binding domain IPR002888 [2Fe-2S]-binding 72 144 8.0E-26
SUPERFAMILY SSF47741 CO dehydrogenase ISP C-domain like IPR036884 [2Fe-2S]-binding domain superfamily 80 150 1.2E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.