Pseudomonas syringae pv. tomato DC3000, PSPTO_1007
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pst00051 | Fructose and mannose metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst00520 | Amino sugar and nucleotide sugar metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF16363 | GDP-mannose 4,6 dehydratase | IPR016040 | NAD(P)-binding domain | 5 | 305 | 4.1E-59 |
| Gene3D | G3DSA:3.90.25.10 | - | - | - | 177 | 304 | 5.9E-83 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 1 | 313 | 4.24E-72 |
| PANTHER | PTHR43000 | DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED | - | - | 2 | 311 | 2.0E-46 |
| Gene3D | G3DSA:3.40.50.720 | - | - | - | 3 | 297 | 5.9E-83 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.