Pseudomonas syringae pv. tomato DC3000, PSPTO_2339 (pcaG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008199 ferric iron binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00775
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00775
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019439 aromatic compound catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03463
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF49482
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03463
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0018578 protocatechuate 3,4-dioxygenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03463
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006725 cellular aromatic compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00775
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst01220 Degradation of aromatic compounds 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc 4-sulfocatechol degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR02423 JCVI: protocatechuate 3,4-dioxygenase subunit alpha IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit 9 200 4.7E-73
SUPERFAMILY SSF49482 Aromatic compound dioxygenase IPR015889 Intradiol ring-cleavage dioxygenase, core 4 200 4.71E-58
PANTHER PTHR33711 DIOXYGENASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G02910)-RELATED - - 6 199 9.1E-42
Gene3D G3DSA:2.60.130.10 Aromatic compound dioxygenase IPR015889 Intradiol ring-cleavage dioxygenase, core 2 200 4.6E-54
Pfam PF00775 Dioxygenase IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal 41 190 2.9E-15
FunFam G3DSA:2.60.130.10:FF:000001 Protocatechuate 3,4-dioxygenase alpha chain - - 2 200 1.6E-116
CDD cd03463 3,4-PCD_alpha IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit 6 199 1.14414E-85

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.