Pseudomonas syringae pv. tomato DC3000, PSPTO_2340 (pcaK)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 300 440 1.7E-10
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 25 299 9.9E-53
CDD cd17365 MFS_PcaK_like - - 32 423 6.67527E-101
NCBIfam TIGR00895 JCVI: aromatic acid/H+ symport family MFS transporter IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family 14 413 0.0
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 18 440 3.53E-77
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 36 406 1.3E-42
PANTHER PTHR23508 CARBOXYLIC ACID TRANSPORTER PROTEIN HOMOLOG - - 16 436 7.5E-72

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.