Pseudomonas syringae pv. tomato DC3000, PSPTO_2397
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 85 | 96 | 4.5E-40 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 138 | 146 | 8.4E-11 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 160 | 179 | 8.4E-11 |
| Pfam | PF13561 | Enoyl-(Acyl carrier protein) reductase | - | - | 15 | 251 | 6.1E-59 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 215 | 235 | 4.5E-40 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 181 | 198 | 4.5E-40 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 10 | 27 | 4.5E-40 |
| Gene3D | G3DSA:3.40.50.720 | - | - | - | 1 | 251 | 1.3E-73 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 85 | 96 | 8.4E-11 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 160 | 179 | 4.5E-40 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 4 | 253 | 1.56E-73 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 132 | 148 | 4.5E-40 |
| FunFam | G3DSA:3.40.50.720:FF:000240 | SDR family oxidoreductase | - | - | 1 | 253 | 2.0E-83 |
| PANTHER | PTHR42760 | SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER | - | - | 2 | 251 | 1.7E-68 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.