Pseudomonas syringae pv. tomato DC3000, PSPTO_3076

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3076
NCBI Old Locus TagPSPTO3076
Name
Synonym: PSPTO3076
Replicon chromosome
Genomic location 3459207 - 3459788 (+ strand)

Cross-References

RefSeq NP_792870.1
GI 28870251
Entrez 1184733
INSDC AAO56565.1
NCBI Locus Tag PSPTO_3076
NCBI Old Locus Tag PSPTO3076
UniParc UPI0000008E03
UniProtKB Acc Q880S5
UniProtKB ID Q880S5_PSESM
UniRef100 UniRef100_Q880S5
UniRef50 UniRef50_S0AHF8
UniRef90 UniRef90_Q880S5

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.17
Kyte-Doolittle Hydrophobicity Value -0.091
Molecular Weight (kDa) 21.5
Isoelectric Point (pI) 6.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 302 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3076

Human Homologs

References

No references are associated with this feature.