Pseudomonas syringae pv. tomato DC3000, PSPTO_3474

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006812 cation transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR34584
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR34584
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008324 cation transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR34584
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF019239 MrpE IPR002758 Na+/H+ antiporter subunit E 1 162 1.6E-29
Pfam PF01899 Na+/H+ ion antiporter subunit IPR002758 Na+/H+ antiporter subunit E 12 160 1.3E-34
PANTHER PTHR34584 NA(+)/H(+) ANTIPORTER SUBUNIT E1 IPR002758 Na+/H+ antiporter subunit E 4 161 6.9E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.