Pseudomonas syringae pv. tomato DC3000, PSPTO_4117
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00691 | OmpA family | IPR006665 | OmpA-like domain | 201 | 278 | 2.9E-12 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 331 | 381 | - |
| SUPERFAMILY | SSF103088 | OmpA-like | IPR036737 | OmpA-like domain superfamily | 174 | 286 | 4.97E-25 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 22 | 45 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 82 | 114 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 22 | 62 | - |
| Gene3D | G3DSA:3.30.1330.60 | - | IPR036737 | OmpA-like domain superfamily | 146 | 292 | 2.3E-25 |
| PANTHER | PTHR30329 | STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX | - | - | 83 | 288 | 1.8E-22 |
| CDD | cd07185 | OmpA_C-like | IPR006665 | OmpA-like domain | 183 | 282 | 8.89796E-27 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.